This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JC3C.2

Laos/LOC_001JC3C.2/2023-10-16

Sample details

Collection date
2023-10-16
Earliest release date
2026-06-15
Sampling location
Laos

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-15 14:22test_user_94c30cc9OPEN
Data use terms URL

Submission details

Submission ID
second
Submitting group
Date submitted
2026-06-15 14:22:44 UTC
Date released
2026-06-15 14:22:48 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
118
Total inserted nucs L segment
1
Total unknown nucs L segment
22
Length L segment
880 (7.08%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • G32A
  • A35G
  • T49C
  • T61C
  • C63G
  • C64T
  • T65C
  • T66C
  • G69A
  • G71T
  • G88A
  • G93A
  • A109G
  • G119A
  • A124G
  • T131A
  • C136T
  • T139C
Deletions
N/A
Insertions

L segment

ins_58:T

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:S6N
  • RdRp:G15S
  • RdRp:S19T
  • RdRp:Y60N
  • RdRp:R63H
  • RdRp:S67V
  • RdRp:R80K
  • RdRp:V82I
  • RdRp:T163A
  • RdRp:M172V
  • RdRp:S205P
  • RdRp:K275R
Deletions
N/A
Insertions
N/A

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