This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019WFP.1

Display Name: France/LOC_0019WFP.1/2024
M. Gasparine & A. Falchi

Sample details

Collection date
2024
Collection date (lower bound)
2024-01-01
Collection date (upper bound)
2024-12-31
Earliest release date
2025-08-10
Collection country
France
Isolate name
743

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-30 16:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
University of Corsica, Unite des Virus Emergents

INSDC

NCBI release date
2025-08-10
INSDC accession S

Host

Host taxon id
Host name scientific
Ixodoidea

Alignment and QC metrics S

Length S
374
Total SNPs S
28
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
20.71%
Total stop codons S
0

Submission details

Submission ID
PV976891.1.S
Submitting group
Date submitted
2026-01-30 16:05:53 UTC
Date released
2026-01-30 16:11:12 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S

  • S:T16A
  • S:C31G
  • S:T33C
  • S:G34A
  • S:G35C
  • S:G55C
  • S:G57A
  • S:A64G
  • S:G70A
  • S:A98T
  • S:A105G
  • S:C150T
  • S:A193C
  • S:A213G
  • S:C225T
  • S:T226C
  • S:C228T
  • S:G240A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3 & OL774851.1 references

    Substitutions

    NP

  • NP:E6Q
  • NP:N9D
  • NP:D11N
  • NP:Y20F
  • NP:S52R
  • NP:Y63H
  • NP:F73I
  • NP:W82S
  • NP:S84N
  • NP:V89L
  • NP:K91R
  • NP:K98N
  • NP:S109T
  • NP:E112Q
    • Deletions
    None
    Insertions
    None

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