This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019WBX.1

Display Name: Thailand/LOC_0019WBX.1/2019-08-10
N. Thammasonthijarern, N. Kosoltanapiwat, W. Nuprasert, P. Sittikul, P. Sriburin, W. Pan-Ngum, P. Maneekan, S. Hataiyusuk, W. Hattasingh, J. Thaipadungpanit & S. Chatchen

Sample details

Collection date
2019-08-10
Collection date (lower bound)
2019-08-10
Collection date (upper bound)
2019-08-10
Earliest release date
2021-06-19
Collection country
Thailand
Isolate name
PC047 S1V1

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-06 07:31insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Mahidol University, Faculty of Tropical Medicine

INSDC

NCBI release date
2021-06-19
NCBI update date
2021-06-19
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
410
Total SNPs
41
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
5.53%
Total stop codons
0

Submission details

Submission ID
MZ004690.1
Submitting group
Date submitted
2026-02-06 07:30:35 UTC
Date released
2026-02-06 07:43:47 UTC

Clade

Clade CV-A16
unassigned

Genotype

Genotype
CV-A16

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • C194T
  • A214G
  • G224A
  • C236T
  • C242T
  • A250G
  • A259G
  • G260A
  • G263A
  • T266C
  • G271A
  • A287G
  • T291A
  • T293C
  • C298T
  • T307C
  • C312A
  • T337C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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