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LOC_0019WAZ.1
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Download FASTA
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Display Name: France/LOC_0019WAZ.1/2024
M. Gasparine &
A. Falchi
Sample details
Collection date
2024
Collection date (lower bound)
2024-01-01
Collection date (upper bound)
2024-12-31
Earliest release date
2025-08-10
Collection country
France
Isolate name
3424
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-01-30 16:06
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
University of Corsica, Unite des Virus Emergents
INSDC
NCBI release date
2025-08-10
INSDC accession S
PV976885.1
Host
Host taxon id
297308
Host name scientific
Ixodoidea
Alignment and QC metrics S
Length S
1547
Total SNPs S
134
Total inserted nucs S
1
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
250
Total frame shifts S
1
Frame shifts S
NP:419-483(nt:1294-1488)
Completeness S
71.76%
Total stop codons S
0
Submission details
Submission ID
PV976885.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-01-30 16:05:53 UTC
Date released
2026-01-30 16:11:12 UTC
Files
Annotations
LOC_0019WAZ.1.embl
Nucleotide mutations
Mutations called relative to the
NC_005301.3
&
OL774851.1
references
Substitutions
S
S:
T
116
C
S:
A
134
T
S:
T
139
C
S:
C
150
T
S:
G
174
A
S:
A
193
G
S:
G
205
C
S:
G
208
C
S:
A
213
G
S:
G
217
C
S:
A
223
G
S:
C
225
T
S:
C
228
T
S:
G
246
A
S:
T
273
C
S:
A
311
G
S:
G
319
C
S:
C
327
T
Show more
Deletions
None
Insertions
ins_S:1293:G
Amino acid mutations
Mutations called relative to the
NC_005301.3
&
OL774851.1
references
Substitutions
NP
NP:
L
26
P
NP:
N
32
I
NP:
Y
34
H
NP:
S
52
G
NP:
D
56
H
NP:
A
57
P
NP:
D
60
H
NP:
I
62
V
NP:
K
91
R
NP:
E
94
Q
NP:
G
101
A
NP:
E
112
Q
NP:
E
121
Q
NP:
D
136
H
NP:
E
161
Q
NP:
V
166
I
NP:
R
195
H
NP:
F
204
I
Show more
Deletions
None
Insertions
None
L (unaligned)
S (unaligned)
L (aligned)
S (aligned)
Aligned amino acid sequences
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