This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019W75.1

Netherlands/LOC_0019W75.1/2021-09-27
L. Gard, E. Lizarazo-Forero, M. Knoesters, A. Ott, A. Brandenburg, M. McCall, H. Niesters & C. Van Leer Buter

University Medical Center Groningen, Medical Microbiology and Infection Prevention

Sample details

Collection date
2021-09-27
Earliest release date
2023-07-01
Sampling location
Netherlands
Isolate name
EV_0550

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2023-07-01
NCBI update date
2023-07-01
INSDC accession
BioProject accession

Host

Host

Submission details

Submission ID
OR179085.1
Submitting group
Date submitted
2026-09-09 16:34:30 UTC
Date released
2026-09-09 16:46:10 UTC

Clade

Clade EV-D68
B3

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
44
Length
340 (4.62%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • T2526A
  • C2529A
  • C2550T
  • A2568G
  • G2577A
  • T2580C
  • G2586A
  • G2589C
  • G2592A
  • G2595T
  • T2596C
  • T2613C
  • G2614A
  • G2619A
  • C2625T
  • C2626T
  • A2628G
  • A2634G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:G76S
  • VP1:K84R
  • VP1:N90D
  • VP1:A92T
  • VP1:S95T
  • VP1:G97Q
  • VP1:H99D
  • VP1:K110R
  • VP1:N142S
  • VP1:D144N
  • VP1:S145N
  • VP1:M148V
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue