This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019VVV.1

Taiwan/LOC_0019VVV.1/2017-10
J.-T. Lee, L.-Y. Chang & A.-L. Cheng

National Taiwan University Hospital Yunlin Branch, Department of Pediatrics

Sample details

Collection date
2017-10
Earliest release date
2019-01-30
Sampling location
Taiwan
Isolate name
NTUH 2017-10

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-01-30
NCBI update date
2019-01-30
INSDC accession

Host

Host

Submission details

Submission ID
MK371394.1
Submitting group
Date submitted
2026-08-12 11:46:28 UTC
Date released
2026-08-12 11:56:04 UTC

Clade

Clade EV-D68
B3

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
98
Length
684 (9.28%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • A2179G
  • T2180A
  • A2181T
  • G2222A
  • C2223T
  • C2226T
  • C2238T
  • T2247C
  • A2259C
  • C2262T
  • C2280T
  • G2298A
  • T2307C
  • T2310A
  • T2316C
  • A2319G
  • A2325G
  • C2346T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:S1L
  • VP1:N2D
  • VP1:V13I
  • VP1:G76S
  • VP1:K84R
  • VP1:N90D
  • VP1:A92T
  • VP1:S95A
  • VP1:G97Q
  • VP1:T98A
  • VP1:H99D
  • VP1:K110R
  • VP1:N142S
  • VP1:N143S
  • VP1:D144N
  • VP1:S145N
  • VP1:M148V

VP3

  • VP3:I166D
  • VP3:S180N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue