This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019T2J.1

Austria/SU1353/2015-08-01
B. Lamp, S. Uebleis, K. Buczolich & H.-P. Fuehrer

Vetmeduni Vienna, Dep. of Pathobiology, Institute of Virology

Sample details

Collection date
2015-08
Earliest release date
2019-08-01
Sampling location
Austria (Leopoldstadt Vienna)
Isolate name
SU1353

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-08-01
NCBI update date
2019-08-01
INSDC accession

Host

Host

Submission details

Submission ID
MF678445.1
Submitting group
Date submitted
2026-10-05 17:01:15 UTC
Date released
2026-10-05 17:13:14 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
213
Length
1008 (9.14%)
Amino Acid Mutations from founder clade
  • NS5:A538V
  • NS5:E638K
  • NS5:V692A
  • NS5:I784T
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C9123A
  • A9126G
  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
  • G9189A
  • T9204A
  • C9207T
  • G9210A
  • G9216A
  • C9219A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions

NS5

  • NS5:R522K
  • NS5:R527K
  • NS5:A538V
  • NS5:R546K
  • NS5:A569S
  • NS5:R590K
  • NS5:E638K
  • NS5:T641G
  • NS5:V692A
  • NS5:V740I
  • NS5:I784T
  • NS5:G805K
Deletions
N/A
Insertions
N/A

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