This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019PFW.1

China/LOC_0019PFW.1
H. Yu & Y. Zhou

Fudan University, School of Public Health, Fudan University, Key Laboratory of Public Health Safety, Ministry of Education

Sample details

Earliest release date
2019-07-02
Sampling location
China (Hunan)
Isolate name
S198B

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2019-07-02
NCBI update date
2019-07-17
INSDC accession

Host

Host

Submission details

Submission ID
MK307221.2
Submitting group
Date submitted
2026-07-22 16:52:47 UTC
Date released
2026-07-22 17:01:40 UTC

Clade

Clade CV-A16
B1b

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
241
Length
1000 (13.5%)

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions
  • A2409G
  • C2412T
  • T2415C
  • G2418A
  • T2421C
  • T2431A
  • T2433G
  • A2436T
  • C2442A
  • G2445A
  • T2448G
  • T2451C
  • G2452C
  • G2453C
  • A2454C
  • C2463T
  • G2475A
  • G2476A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:G3P
  • VP1:A11T
  • VP1:T13N
  • VP1:S14N
  • VP1:R15Q
  • VP1:G17N
  • VP1:A19S
  • VP1:S22A
  • VP1:L23M
  • VP1:E26L
  • VP1:N33E
  • VP1:E36S
  • VP1:L43V
  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V

VP3

  • VP3:S238T
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue