This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_0019P5G.1

Display Name: Iran/LOC_0019P5G.1/2023-05
B. Mohammadi-Ghalehbin, N. Soozangar, F. Jeddi, H. Mirzanejad-Asl, S. Molaei, S. Habibzadeh, H. Peeri Doghaheh, J. Mohammadshahi & A. Spotin

Sample details

Collection date
2023-05
Collection date (lower bound)
2023-05-01
Collection date (upper bound)
2023-05-31
Earliest release date
2023-10-07
Collection country
Iran
Isolate name
57-203334

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-30 16:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Tabriz University od Medical Sceinces, Parasitolgy and Mycology

INSDC

NCBI release date
2023-10-07
INSDC accession S

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics S

Length S
467
Total SNPs S
70
Total inserted nucs S
0
Total deleted nucs S
0
Total ambiguous nucs S
0
Total unknown nucs S
0
Total frame shifts S
0
Completeness S
25.86%
Total stop codons S
0

Submission details

Submission ID
OR391534.1.S
Submitting group
Date submitted
2026-01-30 16:05:53 UTC
Date released
2026-01-30 16:09:58 UTC

Files

Annotations

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S

  • S:C171T
  • S:A186G
  • S:T195C
  • S:C201T
  • S:A213G
  • S:T219C
  • S:C228T
  • S:G231A
  • S:T234G
  • S:G246A
  • S:A252C
  • S:T258C
  • S:T267C
  • S:G276A
  • S:G282T
  • S:T288C
  • S:C294T
  • S:T297C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_005301.3 & OL774851.1 references

    Substitutions

    NP

  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
    • Deletions
    None
    Insertions
    None

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