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LOC_0017CZ8.1
Download
Download FASTA
Download metadata TSV
Turkey/LOC_0017CZ8.1/2016
A. T. Kalaycioglu,
R. Durmaz,
O. Ari,
M. Bakir,
A. Engin &
T. Dal
Karadeniz Technical University, Faculty of Pharmacy Department of Pharmaceutical Microbiology
Sample details
Collection date
2016
Earliest release date
2023-08-15
Sampling location
Turkey
Isolate name
TR-YOZGAT-C50M-2016
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-10 18:00
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2023-08-15
INSDC accession M
OQ935550.1
INSDC accession S
OQ954467.1
Submission details
Submission ID
OQ935550.1.M/OQ954467.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-10 17:59:28 UTC
Date released
2026-03-10 18:04:28 UTC
Host
Host
Homo sapiens
Files
Annotations
LOC_0017CZ8.1.embl
Alignment and QC
Total SNPs M
129
Length M
783 (14.3%)
Variant M
False
Total SNPs S
73
Length S
527 (29.2%)
Variant S
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
M segment
C
1674
T
A
1675
C
C
1688
T
G
1699
A
T
1702
A
G
1709
A
C
1711
T
G
1716
A
C
1717
T
T
1732
C
G
1744
A
C
1750
T
T
1756
C
T
1759
C
G
1769
A
A
1780
G
T
1789
C
G
1798
A
Show more
S segment
T
141
C
C
150
T
G
155
A
T
159
A
T
166
C
C
171
T
A
186
G
T
195
C
C
201
T
A
213
G
C
228
T
G
231
A
T
234
G
G
246
A
A
252
C
A
255
G
T
258
C
T
267
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
V
541
I
GPC:
G
543
D
GPC:
V
561
I
GPC:
R
579
K
GPC:
S
592
T
GPC:
I
598
T
GPC:
K
603
R
GPC:
Y
606
F
GPC:
V
663
I
GPC:
K
669
H
GPC:
I
670
V
GPC:
K
675
R
GPC:
L
707
F
GPC:
I
711
L
GPC:
F
713
Y
GPC:
L
714
S
GPC:
F
718
I
GPC:
R
724
K
Show more
NP
NP:
S
39
N
NP:
A
100
S
NP:
S
109
N
NP:
T
111
A
NP:
Q
179
L
NP:
D
199
E
Deletions
N/A
Insertions
N/A
L (unaligned)
M (unaligned)
S (unaligned)
L (aligned)
M (aligned)
S (aligned)
Aligned amino acid sequences
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