This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00177L5.1

Display Name: China/LOC_00177L5.1/2021
S. Yang & B. Tian

Sample details

Collection date
2021
Collection date (lower bound)
2021-01-01
Collection date (upper bound)
2021-12-31
Earliest release date
2022-04-27
Collection country
China
Collection subdivision level 1
Yunnan
Isolate name
119-QJ-YN-HN-2021-CVA10

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-16 15:06insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
the Laboratory Center; 32 Keji road, Mangshi, Dehong 678400

INSDC

NCBI release date
2022-04-27
NCBI update date
2022-04-28
INSDC accession

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
448
Total SNPs
94
Total inserted nucs
0
Total deleted nucs
0
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
6.05%
Total stop codons
0

Submission details

Submission ID
LC707812.1
Submitting group
Date submitted
2026-02-16 15:06:19 UTC
Date released
2026-02-16 15:21:15 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • A753T
  • T759C
  • A762G
  • T763A
  • T765G
  • G770A
  • G771A
  • A774C
  • A777C
  • T778A
  • C779G
  • C780T
  • C783T
  • G792T
  • G798A
  • T801C
  • G813T
  • C816A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions

    VP4

  • VP4:S7T
  • VP4:R9K
  • VP4:S42T
    • Deletions
    None
    Insertions
    None

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