This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_00177FG.1

Nigeria/LOC_00177FG.1
A. J. Sanchez, M. J. Vincent, S. T. Nichol, V. M. Deyde & M. L. Khristova

Centers for Disease Control and Prevention, Special Pathogens Branch, DVRD, NCID

Sample details

Earliest release date
2003-12-13
Sampling location
Nigeria (Sokoto)
Isolate name
IbAr10200

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-10 18:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2003-12-13
INSDC accession M
Bioproject accession

Submission details

Submission ID
NC_005300.2.M
Submitting group
Date submitted
2026-03-10 17:59:28 UTC
Date released
2026-03-10 18:04:28 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs M
673
Total inserted nucs M
4
Length M
5366 (98.3%)
Variant M
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • G65A
  • T78C
  • T81C
  • C82T
  • G103A
  • G113A
  • T115C
  • T116C
  • C118T
  • T122C
  • G124A
  • A127G
  • C133T
  • A139G
  • G142A
  • A143G
  • A149C
  • C151T
Deletions
N/A
Insertions

M segment

ins_0:TCTC

Amino acid mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:V9I
  • GPC:F10L
  • GPC:K19E
  • GPC:N21H
  • GPC:P23S
  • GPC:G26E
  • GPC:E28R
  • GPC:N31K
  • GPC:H33D
  • GPC:V34T
  • GPC:D39G
  • GPC:S41N
  • GPC:Q42P
  • GPC:P44S
  • GPC:P53S
  • GPC:V54I
  • GPC:P56L
  • GPC:S64T
Deletions
N/A
Insertions
N/A

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