This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001779U.1

Saudi_Arabia/LOC_001779U.1/2019
F. Zakham, A. E. Albalawi, A. D. Alanazi, P. Truong Nguyen, A. S. Alouffi, A. Alaoui, T. Sironen, T. Smura, O. Vapalahti & P. T. Truong Nguyen

University of Helsinki, Department of Virology

Sample details

Collection date
2019
Earliest release date
2021-09-06
Sampling location
Saudi Arabia (Al-Khurma)
Isolate name
KSA_7

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-10 18:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-09-06
INSDC accession S

Submission details

Submission ID
MZ566480.1.S
Submitting group
Date submitted
2026-03-10 17:59:28 UTC
Date released
2026-03-10 18:04:28 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs S
86
Length S
704 (39%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • G587T
  • T594C
  • T597A
  • G600A
  • T609C
  • C612A
  • T615A
  • G618A
  • T630C
  • C636G
  • C660T
  • A687G
  • C702T
  • A708G
  • C711T
  • A717G
  • C732A
  • G759A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:D186E
  • NP:D199E
  • NP:A271T
  • NP:D274E
  • NP:A285T
  • NP:A307P
  • NP:L416P
  • NP:R417N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue