This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001778W.1

Saudi_Arabia/LOC_001778W.1/2019
F. Zakham, A. E. Albalawi, A. D. Alanazi, P. Truong Nguyen, A. S. Alouffi, A. Alaoui, T. Sironen, T. Smura, O. Vapalahti & P. T. Truong Nguyen

University of Helsinki, Department of Virology

Sample details

Collection date
2019
Earliest release date
2021-09-06
Sampling location
Saudi Arabia (Al-Khurma)
Isolate name
KSA_2

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-10 18:00insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-09-06
INSDC accession M

Submission details

Submission ID
MZ566479.1.M
Submitting group
Date submitted
2026-03-10 17:59:28 UTC
Date released
2026-03-10 18:04:28 UTC

Host

Host

Files

Annotations

Alignment and QC

Total SNPs M
225
Length M
746 (13.8%)
Variant M
False

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OR047158.1 references

Substitutions

M segment

  • G1040C
  • A1041G
  • A1042T
  • C1045T
  • A1051G
  • C1054T
  • A1059T
  • A1060G
  • T1063A
  • C1064T
  • T1069C
  • C1072T
  • T1075A
  • C1077T
  • T1078C
  • C1082T
  • A1083T
  • A1084G
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3 & OR047158.1 references

Substitutions

GPC

  • GPC:E322R
  • GPC:I325M
  • GPC:E328V
  • GPC:H330Y
  • GPC:D333E
  • GPC:A334V
  • GPC:Q336L
  • GPC:K338R
  • GPC:L339T
  • GPC:H340P
  • GPC:G341T
  • GPC:S344D
  • GPC:T345V
  • GPC:E347A
  • GPC:S348P
  • GPC:T349S
  • GPC:Q350R
  • GPC:T351A
Deletions
N/A
Insertions
N/A

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