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LOC_0011F48.1
Download
Download FASTA
Download metadata TSV
Bulgaria/LOC_0011F48.1/2024-08-15
I. Christova,
K. Ngoc &
I. Stoikov
National Center of Infectious and Parasitic Diseases, Microbiology
Sample details
Collection date
2024-08-15
Earliest release date
2025-06-04
Sampling location
Bulgaria
Isolate name
BG111-2024
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-16 20:51
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2025-06-04
INSDC accession L
PV696553.1
INSDC accession M
PV696551.1
INSDC accession S
PV696549.1
Submission details
Submission ID
PV696553.1.L/PV696551.1.M/PV696549.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-16 20:50:49 UTC
Date released
2026-03-16 20:56:40 UTC
Host
Host
Homo sapiens
Files
Annotations
LOC_0011F48.1.embl
Alignment and QC
Total SNPs M
1079
Total inserted nucs M
3
Total deleted nucs M
14
Length M
5333 (97.9%)
Variant M
False
Total SNPs L
621
Total inserted nucs L
1
Length L
5931 (49%)
Variant L
False
Total SNPs S
258
Total inserted nucs S
11
Length S
1668 (91.7%)
Variant S
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
L segment
A
35
G
A
42
T
G
43
T
T
49
C
T
58
C
C
59
T
C
63
T
C
64
G
T
66
C
T
67
C
A
72
G
A
73
C
A
91
G
G
93
A
C
100
T
A
109
G
A
113
G
T
131
A
Show more
M segment
T
36
G
G
46
A
A
47
G
T
63
C
T
64
C
T
67
A
G
72
C
A
76
G
T
78
C
T
79
C
G
80
A
T
81
C
T
87
C
C
88
T
A
95
G
T
96
C
T
98
C
C
99
T
Show more
S segment
C
2
T
C
3
G
T
16
A
C
31
G
T
33
C
G
34
T
C
36
T
A
51
G
T
63
C
A
65
G
A
93
G
A
98
T
C
99
T
A
105
G
G
118
A
C
126
T
T
141
C
C
150
T
Show more
Deletions
M segment
317-319, 5276-5286
Insertions
L segment
ins_67:C
M segment
ins_49:AG, ins_5167:T
S segment
ins_0:AAGAGAACACT
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
I
3
A
GPC:
S
4
L
GPC:
M
6
A
GPC:
Y
7
C
GPC:
A
8
F
GPC:
V
9
I
GPC:
F
10
L
GPC:
C
11
Y
GPC:
C
15
L
GPC:
K
19
G
GPC:
T
20
A
GPC:
N
21
H
GPC:
G
22
V
GPC:
P
23
Q
GPC:
H
24
P
GPC:
G
26
A
GPC:
N
31
R
GPC:
H
33
N
Show more
NP
NP:
N
9
S
NP:
Y
20
F
NP:
V
27
M
NP:
S
39
N
NP:
A
100
S
NP:
S
109
N
NP:
T
111
A
NP:
Q
179
L
NP:
D
199
E
NP:
K
265
R
NP:
R
270
K
NP:
A
307
P
NP:
Y
311
F
NP:
V
327
I
NP:
N
419
S
NP:
R
428
K
RdRp
RdRp:
S
6
N
RdRp:
I
13
V
RdRp:
S
19
T
RdRp:
D
55
A
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
L
RdRp:
R
80
K
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
I
176
M
RdRp:
N
206
Y
RdRp:
K
218
R
RdRp:
K
275
R
RdRp:
I
279
V
RdRp:
V
352
I
RdRp:
N
453
S
RdRp:
I
505
T
Show more
Deletions
GPC
GPC:82
Insertions
N/A
L (unaligned)
M (unaligned)
S (unaligned)
L (aligned)
M (aligned)
S (aligned)
Aligned amino acid sequences
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