This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDQM.1

Display Name: Taiwan/LOC_000SDQM.1
C. H. Chen & M. T. Wan

Sample details

Collection date (upper bound)
2006-10-08
Earliest release date
2006-10-08
Collection country
Taiwan
Isolate name
HME-310

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-15 08:09insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Tatung University, Bioengineering

INSDC

NCBI release date
2006-10-08
INSDC accession CV-A16

Alignment and QC metrics CV-A16

Length CV-A16
302
Total SNPs CV-A16
29
Total inserted nucs CV-A16
0
Total deleted nucs CV-A16
6077
Total ambiguous nucs CV-A16
0
Total unknown nucs CV-A16
0
Total frame shifts CV-A16
0
Completeness CV-A16
86.05%

Submission details

Submission ID
DQ984529.1.CV-A16
Submitting group
Date submitted
2025-10-15 08:09:46 UTC
Date released
2025-10-15 08:15:02 UTC

Clade

Clade CV-A16
B

Genotype

Genotype
CV-A16

Files

Annotations

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • G263A
  • C265T
  • A276G
  • C339T
  • T342A
  • G360A
  • T385C
  • G386A
  • C399T
  • A400G
  • T414C
  • G415A
  • T420C
  • C425T
  • A426G
  • G490A
  • A492G
  • A494G
    • Deletions
    550-6626
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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