This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SDBE.1

France/LOC_000SDBE.1/2024
M. Gasparine & A. Falchi

University of Corsica, Unite des Virus Emergents

Sample details

Collection date
2024
Earliest release date
2025-08-10
Sampling location
France
Isolate name
1008

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-09 12:54insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-08-10
INSDC accession S

Submission details

Submission ID
PV976893.1.S
Submitting group
Date submitted
2026-03-09 12:54:28 UTC
Date released
2026-03-09 13:00:34 UTC

Host

Host

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
125
Total inserted nucs S
1
Length S
1629 (97.4%)
Variant S
True

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G67A
  • G99A
  • C166T
  • C178A
  • G189A
  • T199C
  • G202A
  • A209G
  • C235T
  • C241T
  • C244T
  • A247G
  • G262A
  • G271A
  • C295T
  • A298G
  • A322G
  • G346A
Deletions
N/A
Insertions

S

ins_1577:A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R15K
  • NP:R45K
  • NP:S52G
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
  • NP:S301G
  • NP:K428R
  • NP:V436I
Deletions
N/A
Insertions
N/A

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