This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SBX9.1

Denmark/LOC_000SBX9.1/2016-10
S. E. Midgley, A. G. Nielsen, R. Trebbien, P. H. Andersen & T. K. Fischer

Statens Serum Institut, Virus and Microbiological Specialised Diagnostics

Sample details

Collection date
2016-10
Earliest release date
2018-07-28
Sampling location
Denmark
Isolate name
DK16-19

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-21 12:37insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2018-07-28
NCBI update date
2018-07-28
INSDC accession

Host

Host

Submission details

Submission ID
MG367624.1
Submitting group
Date submitted
2026-05-21 12:37:20 UTC
Date released
2026-05-21 12:46:10 UTC

Clade

Clade EV-A71
C1

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
52
Total ambiguous nucs
1
Length
250 (3.36%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • T1251C
  • A1253T
  • T1259G
  • C1268T
  • C1274A
  • T1280G
  • T1286C
  • T1292A
  • C1295T
  • T1301C
  • C1304T
  • G1310A
  • G1313A
  • A1316T
  • C1319A
  • G1325T
  • A1328T
  • T1329C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP2

  • VP2:N143D
  • VP2:S144T
Deletions
N/A
Insertions
N/A

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