This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SATJ.1

Display Name: Norway/LOC_000SATJ.1/2003-06
E. Witso, G. Palacios, O. Cinek, L. C. Stene, B. Grinde, D. Janowitz, W. I. Lipkin & K. S. Ronningen

Sample details

Collection date
2003-06
Collection date (lower bound)
2003-06-01
Collection date (upper bound)
2003-06-30
Earliest release date
2006-11-07
Collection country
Norway
Isolate name
NO-862

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-30 22:54insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Norwegian Institute of Public Health, Div. of Epidemiology

INSDC

NCBI release date
2006-11-07
INSDC accession EV-A71

Alignment and QC metrics EV-A71

Length EV-A71
591
Total SNPs EV-A71
114
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
7.98%

Submission details

Submission ID
DQ317236.1.EV-A71
Submitting group
Date submitted
2025-10-30 22:53:29 UTC
Date released
2025-10-30 22:58:22 UTC

Clade

Clade EV-A71
C1

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • A2894G
  • C2897T
  • T2906G
  • A2909G
  • C2918T
  • A2924G
  • C2939A
  • T2942C
  • T2943C
  • G2945C
  • T2948A
  • C2953A
  • G2957T
  • G2963C
  • A2972G
  • C2981T
  • A2984G
  • C2986T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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