This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SAPS.1

China/LOC_000SAPS.1/2017
A. Moming, X. Yue, S. Shen, C. Chang, C. Wang, T. Luo, Y. Zhang, R. Guo, Z. Hu, F. Deng & S. Sun

Xinjiang University, Xinjiang Key Laboratory of Biological Resources and Genetic Engineering

Sample details

Collection date
2017
Earliest release date
2018-03-21
Sampling location
China
Isolate name
WG17176

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-03-21
INSDC accession S segment

Host

Host

Submission details

Submission ID
MG696082.1.S
Submitting group
Date submitted
2026-10-13 10:58:15 UTC
Date released
2026-10-13 11:01:48 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
38
Length S segment
220 (12.2%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • A315T
  • C316A
  • T318G
  • A321G
  • A333G
  • G339A
  • C342G
  • C345T
  • G351A
  • T354A
  • A363G
  • T372C
  • A378G
  • T387A
  • C390T
  • A393C
  • A396T
  • G409T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:L93M
  • NP:D116E
  • NP:K119N
  • NP:A124S
  • NP:I162F
Deletions
N/A
Insertions
N/A

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