This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000SAPS.1

Turkey/LOC_000SAPS.1/2015-05-25
E. Sahin, T. Farzani, A. Coleri Cihan & A. Ozkul

Ankara University, Biology

Sample details

Collection date
2015-05-25
Earliest release date
2018-03-21
Sampling location
Turkey
Isolate name
KAST2012

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-03-21
INSDC accession M

Host

Host

Submission details

Submission ID
MG969426.1.M
Submitting group
Date submitted
2026-10-02 14:57:48 UTC
Date released
2026-10-02 15:00:14 UTC

Files

Annotations

Alignment and QC

Total SNPs M
295
Length M
1938 (36.1%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • T3210A
  • A3212G
  • C3216T
  • A3218G
  • T3221C
  • C3226T
  • C3229T
  • C3236T
  • C3246T
  • T3254C
  • T3263C
  • A3266G
  • G3272A
  • T3275C
  • T3311C
  • A3313G
  • G3314A
  • A3322T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:L1040M
  • GPC:T1045I
  • GPC:A1046V
  • GPC:Q1074R
  • GPC:Y1077F
  • GPC:S1103T
  • GPC:I1118V
  • GPC:V1137I
  • GPC:G1158E
  • GPC:L1210V
  • GPC:Y1219H
  • GPC:R1284K
  • GPC:V1314I
  • GPC:K1331R
  • GPC:P1342S
  • GPC:S1380A
  • GPC:N1394T
  • GPC:I1440V
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue