This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S6QU.1

Pakistan/LOC_000S6QU.1/2018-05-03
Shahid MF, Yaqub T, Ali M, Ul-Rahman A, Bente DA, M. F. Shahid, T. Yaqub, M. Ali, A. Ul-Rahman & D. A. Bente

University of Veterinary and Animal Sciences, Institute of Microbiology

Sample details

Collection date
2018-05-03
Earliest release date
2021-04-21
Sampling location
Pakistan
Isolate name
PAK-KK-T/133

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-21 01:07insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2021-04-21
INSDC accession S

Submission details

Submission ID
MW915548.1.S
Submitting group
Date submitted
2026-02-21 01:07:16 UTC
Date released
2026-02-21 01:13:17 UTC

Host

Host

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
29
Length S
195 (11.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G367A
  • C370T
  • A379G
  • T385C
  • G397A
  • C400T
  • C403A
  • C406T
  • G409C
  • G418A
  • G421A
  • A425T
  • G428A
  • G429A
  • T430C
  • A439G
  • C445T
  • T446C
    • Deletions
    N/A
    Insertions
    N/A

    Amino acid mutations

    Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

    Substitutions

    NP

  • NP:D116E
  • NP:T124S
  • NP:G125N
    • Deletions
    N/A
    Insertions
    N/A

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