This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S68T.1

Display Name: USA/LOC_000S68T.1
W. A. Nix, M. S. Oberste & M. A. Pallansch

Sample details

Collection date (upper bound)
2005-07-31
Earliest release date
2005-07-31
Collection country
USA

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-24 05:44insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Centers for Disease Control and Prevention, Respiratory and Enteric Viruses Branch

INSDC

NCBI release date
2005-07-31
INSDC accession CV-A10

Alignment and QC metrics CV-A10

Length CV-A10
303
Total SNPs CV-A10
73
Total inserted nucs CV-A10
0
Total deleted nucs CV-A10
0
Total ambiguous nucs CV-A10
0
Total unknown nucs CV-A10
0
Total frame shifts CV-A10
0
Completeness CV-A10
4.09%

Submission details

Submission ID
AY903639.1.CV-A10
Submitting group
Date submitted
2025-10-24 05:43:58 UTC
Date released
2025-10-24 05:48:17 UTC

Clade

Clade CV-A10
F

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • A2595T
  • C2607T
  • T2610C
  • A2628C
  • A2631G
  • G2634C
  • G2637C
  • C2643A
  • A2644G
  • G2646T
  • G2651A
  • A2658G
  • G2670C
  • T2673C
  • A2676T
  • G2678A
  • T2679C
  • T2682C
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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