This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000S66X.1

Netherlands/LOC_000S66X.1/2021-10-28
R. Molenkamp, J. C. Rahamat - Langendoen, J. J. C. Voermans & F. B. van Loenen

National Institute for Public Health and the Environment, Centre for Infectious Disease Research, Diagnostics and Screening

Sample details

Collection date
2021-10-28
Earliest release date
2023-12-31
Sampling location
Netherlands
Isolate name
NL05-21-09

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-17 13:07insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2023-12-31
NCBI update date
2023-12-31
INSDC accession

Host

Host

Submission details

Submission ID
OQ139554.1
Submitting group
Date submitted
2026-03-17 13:06:56 UTC
Date released
2026-03-17 13:22:29 UTC

Clade

Clade EV-D68
B3

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
30
Total ambiguous nucs
1
Length
185 (2.5%)
Variant
False

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions

  • G2679A
  • C2683G
  • C2685T
  • A2688G
  • T2694C
  • T2697C
  • T2712C
  • T2715C
  • A2717G
  • T2721C
  • C2727A
  • T2731C
  • C2743T
  • G2745A
  • T2763C
  • G2766A
  • A2778G
  • C2784T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:H99D
  • VP1:K110R
  • VP1:N142S
  • VP1:D144N
  • VP1:S145N
  • VP1:M148V
Deletions
N/A
Insertions
N/A

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