This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QFX9.1

Spain/LOC_000QFX9.1/2020
M. A. Habela Martinez-Estellez, T. del Peso Pimentel, A. C. Grande Avila, A. M. Garcia Lopez, J. Mata-Garcia Soldado, Md. M. Tapia Perea, F. Molero Sanz, L. Herrero Romero, A. S. Olmeda, F. Valcarcel, P. Sanchez-Mora, A. Negredo Anton & M. P. Sanchez-Seco

Instituto de Salud Carlos III, Arboviruses

Sample details

Collection date
2020
Earliest release date
2026-03-10
Sampling location
Spain
Isolate name
Caceres_100_2020

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 06:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2026-03-10
INSDC accession S segment

Host

Host

Submission details

Submission ID
PX000068.1.S
Submitting group
Date submitted
2026-05-09 06:41:32 UTC
Date released
2026-05-09 06:51:37 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
6
Length S segment
502 (27.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C228T
  • A311G
  • A321G
  • G330A
  • G504A
  • T591G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K91R
Deletions
N/A
Insertions
N/A

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