This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000QC9P.1

Armenia/LOC_000QC9P.1/2023
A. Zhirova, Y. Lisitskaya & A. Volynkina

Stavropol State Research Anti-Plague Institute, Laboratory for diagnostics of viral infections

Sample details

Collection date
2023
Earliest release date
2025-03-02
Sampling location
Armenia
Isolate name
279-ARM-TI-2023

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 06:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-03-02
INSDC accession S segment

Host

Host

Submission details

Submission ID
PQ878901.1.S
Submitting group
Date submitted
2026-05-09 06:41:32 UTC
Date released
2026-05-09 06:51:37 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
81
Length S segment
538 (29.8%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C99T
  • G118A
  • C126T
  • T141C
  • C150T
  • G155A
  • T159A
  • T165C
  • T166C
  • C171T
  • C183T
  • A186G
  • T195C
  • C201T
  • A213G
  • T219C
  • C228T
  • G231A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:V27M
  • NP:S39N
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A

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