This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q9CL.1

Iran/LOC_000Q9CL.1/2022
S. Sarmadi, H. Najafi, Z. Ziafati Kafi, N. Sadri, F. Jamiri, A. Bakhshi, A. Abbassioun & A. Ghalyanchi Langeroudi

University of Tehran, Microbiology & Immunology

Sample details

Collection date
2022
Earliest release date
2024-01-24
Sampling location
Iran
Isolate name
UT-SS1

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-05-09 06:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2024-01-24
INSDC accession S segment

Host

Host

Submission details

Submission ID
PP107910.1.S
Submitting group
Date submitted
2026-05-09 06:41:32 UTC
Date released
2026-05-09 06:50:32 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
22
Length S segment
154 (8.53%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T318G
  • A321G
  • C327T
  • G330A
  • G339A
  • C342G
  • C345T
  • G351A
  • A363G
  • A378G
  • T387A
  • C390T
  • A393C
  • G409T
  • T414C
  • A423G
  • C429T
  • T430C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:D116E
  • NP:A124S
Deletions
N/A
Insertions
N/A

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