This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3Q1.1

LOC_000Q3Q1.1
R. Lofts, L. Hodgson & J. F. Smith

National Center for Biotechnology Information, NIH

Sample details

Earliest release date
2003-12-13
Isolate name
10200

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2003-12-13
INSDC accession S segment
BioProject accession

Submission details

Submission ID
NC_005302.1.S
Submitting group
Date submitted
2026-07-10 15:20:24 UTC
Date released
2026-07-10 15:24:23 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
129
Total inserted nucs S segment
16
Total deleted nucs S segment
1
Length S segment
1672 (91.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • T16A
  • C31G
  • G34A
  • A38G
  • A51G
  • A83G
  • A84G
  • A98T
  • A162C
  • A173G
  • C183T
  • A186G
  • A213G
  • T219C
  • G231A
  • A255G
  • T279C
  • G282A
Deletions

S segment

1562
Insertions

S segment

ins_0:TCTCAAAGAAACACGT

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K15R
  • NP:Y20F
  • NP:K45R
  • NP:A124T
  • NP:N125G
  • NP:Q179L
  • NP:R195H
  • NP:V246I
  • NP:G301S
  • NP:R428K
  • NP:I436V
Deletions
N/A
Insertions
N/A

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