This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q3KB.1

India/LOC_000Q3KB.1/2019
P. Yadav, A. Shete-Aich, D. Nyayanit & R. Sahay

National Institute of Virology, Maximum Containment Laboratory

Sample details

Collection date
2019
Earliest release date
2021-08-07
Sampling location
India (Gujarat State, Surendra Nagar)
Isolate name
MCL-19-H-3460

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2021-08-07
INSDC accession M

Host

Host

Submission details

Submission ID
MW298545.1.M
Submitting group
Date submitted
2026-10-30 18:26:46 UTC
Date released
2026-10-30 18:30:16 UTC

Files

Annotations

Alignment and QC

Total SNPs M
712
Length M
5336 (99.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

M

  • C82T
  • C85T
  • T86C
  • A107G
  • A117G
  • C119T
  • C120T
  • T122C
  • C126T
  • A128G
  • T137C
  • G143A
  • A146G
  • G149A
  • C153A
  • T155C
  • T159C
  • C160T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

GPC

  • GPC:I9V
  • GPC:L10F
  • GPC:H21N
  • GPC:S23L
  • GPC:E26G
  • GPC:R28E
  • GPC:D33H
  • GPC:T34V
  • GPC:G39D
  • GPC:N41S
  • GPC:P42L
  • GPC:S44P
  • GPC:V48A
  • GPC:T50A
  • GPC:S53P
  • GPC:I54V
  • GPC:L56P
  • GPC:G69R
Deletions
N/A
Insertions
N/A

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