This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q33A.1

Japan/LOC_000Q33A.1
K. Wakatsuki, S. Yamasaki, K. Manabe & A. Takeda

Kiyoko Wakatsuki, Fukuoka City Institute for Hygiene and Environment; Jigyohama2-1-34, Chuo-ku Fukuoka, Fukuoka 810-0065

Sample details

Earliest release date
2004-03-19
Sampling location
Japan
Isolate name
Fukuoka City03-96

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2004-03-19
NCBI update date
2016-07-26
INSDC accession

Submission details

Submission ID
AB168001.2
Submitting group
Date submitted
2026-11-02 13:32:01 UTC
Date released
2026-11-02 13:34:49 UTC

Clade

Clade EV-A71
C1

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
134
Length
695 (9.38%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • T2636A
  • C2651T
  • A2654G
  • T2657C
  • A2669G
  • C2675T
  • T2678C
  • T2684C
  • C2690T
  • A2699G
  • C2702G
  • T2703C
  • G2711A
  • T2720C
  • T2723C
  • A2729C
  • A2730G
  • G2732A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue