This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000Q2KC.1

LOC_000Q2KC.1
S. A. Sanders, L. J. Herrero, K. McPhie, S. S. Chow, M. E. Craig, D. E. Dwyer, W. Rawlinson & P. C. McMinn

Telethon Institute for Child Health Research, Virology

Sample details

Earliest release date
2005-12-15
Isolate name
2790-SYD-01

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-03 13:48insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2005-12-15
NCBI update date
2016-07-26
INSDC accession

Submission details

Submission ID
AY722911.1
Submitting group
Date submitted
2026-03-03 13:48:25 UTC
Date released
2026-03-03 13:50:41 UTC

Clade

Clade EV-A71
B4

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
172
Length
891 (12%)
Variant
False

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2440C
  • G2441A
  • C2444T
  • T2462A
  • A2491G
  • C2495A
  • C2498T
  • C2503A
  • A2504G
  • T2507C
  • T2508C
  • A2510G
  • T2513A
  • A2516T
  • C2519A
  • C2525T
  • C2527A
  • A2528G
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:G1A
  • VP1:K18R
  • VP1:P22Q
  • VP1:P30Q
  • VP1:D31N
  • VP1:K43E
  • VP1:A58T
  • VP1:K98E
  • VP1:R145Q
  • VP1:D164E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S184T
  • VP1:E244K
  • VP1:S246P
  • VP1:I249V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

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