This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PZVX.1

Tajikistan/LOC_000PZVX.1/1991
J. D. Meissner, S. S. Seregin, S. V. Seregin, O. I. Vyshemirskii, E. I. Samokhvalov, D. K. Lvov, S. V. Netesov & V. S. Petrov

State Research Center for Virology and Biotechnology 'Vector'

Sample details

Collection date
1991
Earliest release date
2005-04-24
Sampling location
Tajikistan
Isolate name
9102

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2005-04-24
INSDC accession L segment

Submission details

Submission ID
AY995161.2.L
Submitting group
Date submitted
2026-09-04 15:29:37 UTC
Date released
2026-09-04 15:31:04 UTC

Clade & Lineage

Closest reference L segment
singleReference (variant)

Files

Annotations

Alignment and QC

Total SNPs L segment
145
Length L segment
1057 (8.73%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 reference

Substitutions

L segment

  • T2086C
  • C2098T
  • A2101G
  • C2108T
  • G2122A
  • T2123C
  • G2131A
  • C2143T
  • C2144T
  • G2146A
  • C2152T
  • G2161A
  • G2173A
  • C2179T
  • T2182C
  • A2188G
  • C2200T
  • C2206T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 reference

Substitutions

RdRp

  • RdRp:R764K
  • RdRp:L765P
  • RdRp:K769G
  • RdRp:R770K
  • RdRp:D771G
  • RdRp:G772K
  • RdRp:D773E
  • RdRp:G778D
  • RdRp:Q780H
  • RdRp:S782N
  • RdRp:I783A
  • RdRp:T784I
  • RdRp:S790N
  • RdRp:S792L
  • RdRp:K809R
  • RdRp:F810L
  • RdRp:G812E
  • RdRp:K940R
  • RdRp:T956A
  • RdRp:I1008V
Deletions
N/A
Insertions
N/A

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