This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PEH6.1

France/LOC_000PEH6.1/2016-06-01
I. Schuffenecker, L. Josset, A. Bal & B. Lina

Hospices Civils de Lyon, Centre National de Reference des Enterovirus et Parechovirus

Sample details

Collection date
2016-06-01
Earliest release date
2018-10-30
Sampling location
France
Isolate name
PAR16-E0-743-FRA16

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2018-10-30
NCBI update date
2018-10-30
INSDC accession

Host

Host

Submission details

Submission ID
MF770669.1
Submitting group
Date submitted
2026-07-17 10:32:30 UTC
Date released
2026-07-17 10:39:51 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
49
Total unknown nucs
1
Length
304 (4.09%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • T2600A
  • G2603A
  • G2606A
  • T2618C
  • T2624C
  • T2636A
  • T2648C
  • C2651T
  • T2657C
  • A2669G
  • C2672T
  • C2675T
  • T2678C
  • C2690T
  • A2696G
  • A2699G
  • C2702G
  • T2720C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K98E
  • VP1:R145E
Deletions
N/A
Insertions
N/A

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