This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PDK3.1

Display Name: China/LOC_000PDK3.1/2019
X. Tang

Sample details

Collection date
2019
Collection date (lower bound)
2019-01-01
Collection date (upper bound)
2019-12-31
Earliest release date
2023-01-30
Collection country
China
Isolate name
EV71-19081

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-25 10:16insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Chongqing Medical University, Academy of pediatrics

INSDC

NCBI release date
2023-01-30
INSDC accession EV-A71

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics EV-A71

Length EV-A71
760
Total SNPs EV-A71
140
Total inserted nucs EV-A71
0
Total deleted nucs EV-A71
0
Total ambiguous nucs EV-A71
0
Total unknown nucs EV-A71
0
Total frame shifts EV-A71
0
Completeness EV-A71
10.26%
Total stop codons EV-A71
0

Submission details

Submission ID
OP351738.1.EV-A71
Submitting group
Date submitted
2025-11-25 10:15:56 UTC
Date released
2025-11-25 11:07:00 UTC

Clade

Clade EV-A71
C4

Genotype

Genotype
EV-A71

Files

Annotations

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions

  • G2465A
  • T2471C
  • T2480C
  • T2483C
  • A2491G
  • G2492A
  • C2501T
  • C2503A
  • A2504C
  • T2513A
  • C2527A
  • A2528G
  • G2529A
  • C2534A
  • A2537G
  • C2552A
  • T2553C
  • A2555G
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U22521.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue