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LOC_000PD24.1
Download
Download FASTA
Download metadata TSV
Albania/LOC_000PD24.1/2013-04-23
A. Papa,
E. Velo,
P. Kadiaj,
K. Tsioka,
A. Kontana,
M. Kota &
S. Bino
Aristotle University of Thessaloniki, A' Dept. of Microbiology
Sample details
Collection date
2013-04-23
Earliest release date
2017-09-02
Sampling location
Albania
Isolate name
ALB-K6/2013
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-04-20 13:49
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2017-09-02
INSDC accession S segment
MF612179.1
Host
Host
hard ticks; hardbacked ticks; scale ticks (Rhipicephalus bursa)
Submission details
Submission ID
MF612179.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-04-20 13:49:12 UTC
Date released
2026-04-20 13:53:53 UTC
Clade & Lineage
Closest reference S segment
S11 (MK299338.1) (variant)
Files
Annotations
LOC_000PD24.1.embl
Alignment and QC
Total SNPs S segment
20
Length S segment
220 (13.1%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
&
MK299338.1
references
Substitutions
S segment
T
309
C
A
315
C
T
333
G
C
342
T
A
348
G
C
360
T
T
367
A
C
369
A
A
420
G
C
423
T
C
429
T
T
432
C
T
447
C
A
456
G
T
474
C
A
483
G
C
486
T
G
492
A
T
496
C
G
507
A
Deletions
N/A
Insertions
N/A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
&
MK299338.1
references
Substitutions
NP
NP:
S
105
T
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
S segment
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