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LOC_000PD24.1
Download
Download FASTA
Download metadata TSV
Uzbekistan/LOC_000PD24.1/1967
A. N. Lukashev,
A. S. Klimentov,
S. E. Smirnova,
T. K. Dzagurova,
J. F. Drexler &
A. P. Gmyl
Chumakov Institute of Poliomyelitis and Viral Encephalitides
Sample details
Collection date
1967
Earliest release date
2016-12-07
Sampling location
Uzbekistan
Isolate name
Hodzha
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-19 09:51
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2016-12-07
INSDC accession L segment
KX013447.1
INSDC accession M segment
KX013448.1
INSDC accession S segment
KX013449.1
Host
Host
human (Homo sapiens)
Submission details
Submission ID
KX013447.1.L/KX013448.1.M/KX013449.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-19 09:50:57 UTC
Date released
2026-06-19 09:53:49 UTC
Clade & Lineage
Closest reference L segment
singleReference (variant)
Closest reference M segment
M (MH396653.1) (variant)
Closest reference S segment
S1 (OL774851.1) (variant)
Files
Annotations
LOC_000PD24.1.embl
Alignment and QC
Total SNPs M segment
611
Total inserted nucs M segment
1
Total deleted nucs M segment
11
Length M segment
5332 (97.9%)
Total SNPs L segment
1637
Total inserted nucs L segment
40
Length L segment
12134 (99.9%)
Total SNPs S segment
228
Length S segment
1632 (90.4%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
L segment
G
23
T
G
32
A
A
35
G
G
43
C
C
48
T
C
59
T
T
62
C
C
64
T
T
65
G
T
70
C
G
71
T
A
72
T
C
82
T
C
85
T
G
93
A
A
109
G
G
110
A
G
112
A
Show more
M segment
G
65
A
T
67
A
G
72
A
A
76
G
T
78
C
C
82
T
A
84
G
C
88
T
C
99
T
A
108
G
T
115
A
T
116
C
C
118
T
T
122
C
A
127
G
T
129
A
G
132
A
C
133
T
Show more
S segment
T
16
A
C
31
G
T
32
C
G
34
A
A
45
G
C
48
T
T
63
C
A
84
G
A
98
T
C
126
T
T
141
C
C
150
T
T
166
C
A
173
G
G
174
A
G
180
A
C
183
T
A
186
G
Show more
Deletions
M segment
5285-5295
Insertions
L segment
ins_66:CC, ins_11927:GT, ins_12035:CAATCAATTCATCTATTTTGGTGCAATTCTTTC, ins_12108:GTG
M segment
ins_5166:A
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
S
4
L
GPC:
Y
7
C
GPC:
F
10
L
GPC:
L
14
Q
GPC:
C
15
Y
GPC:
K
19
E
GPC:
N
21
H
GPC:
G
22
R
GPC:
H
24
N
GPC:
N
31
K
GPC:
H
33
N
GPC:
M
35
L
GPC:
D
39
S
GPC:
S
41
K
GPC:
Q
42
L
GPC:
P
53
S
GPC:
P
58
S
GPC:
S
64
T
Show more
NP
NP:
Y
20
F
NP:
K
45
R
NP:
D
116
E
NP:
R
140
C
NP:
N
150
Q
NP:
A
154
S
NP:
Q
179
L
NP:
D
199
E
NP:
R
270
K
NP:
S
275
N
NP:
I
277
T
NP:
A
382
T
NP:
I
395
V
NP:
N
399
D
NP:
R
428
K
RdRp
RdRp:
S
6
N
RdRp:
V
12
I
RdRp:
S
19
T
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
V
RdRp:
R
80
K
RdRp:
V
82
I
RdRp:
L
90
I
RdRp:
I
114
V
RdRp:
T
163
A
RdRp:
A
168
T
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
K
275
R
RdRp:
I
279
V
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L segment
M segment
S segment
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