This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PD24.1

Iran/LOC_000PD24.1/2015
N. Shahhosseini & S. Chinikar

Bernhard Nocht Institute fro Tropical Medicine, virilogy

Sample details

Collection date
2015
Earliest release date
2016-09-03
Sampling location
Iran
Isolate name
Noshahr-43

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2016-09-03
INSDC accession S

Host

Host

Submission details

Submission ID
KT588641.1.S
Submitting group
Date submitted
2026-09-04 15:29:36 UTC
Date released
2026-09-04 15:32:38 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
45
Length S
341 (20.4%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A268C
  • G271A
  • T289C
  • G292A
  • C295T
  • A298C
  • T303C
  • A322T
  • A325G
  • T334G
  • A337G
  • G346A
  • G367A
  • C370A
  • A379G
  • A394G
  • G397A
  • C400T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
Deletions
N/A
Insertions
N/A

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