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LOC_000PD24.1
Download
Download FASTA
Download metadata TSV
Kazakhstan/LOC_000PD24.1/1971
A. N. Lukashev,
A. S. Klimentov,
S. E. Smirnova,
T. K. Dzagurova,
J. F. Drexler &
A. P. Gmyl
Chumakov Institute of Poliomyelitis and Viral Encephalitides
Sample details
Collection date
1971
Earliest release date
2016-12-07
Sampling location
Kazakhstan
Isolate name
K128_76
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-06-03 15:47
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2016-12-07
INSDC accession L
KX013453.1
INSDC accession M
KX013454.1
INSDC accession S
KX013455.1
Host
Host
ticks (Ixodoidea)
Submission details
Submission ID
KX013453.1.L/KX013454.1.M/KX013455.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-06-03 15:47:14 UTC
Date released
2026-06-03 15:49:44 UTC
Lineage
Segment S Lineage
IV.2
Files
Annotations
LOC_000PD24.1.embl
Alignment and QC
Total SNPs M
639
Total inserted nucs M
1
Total deleted nucs M
11
Length M
5327 (99.5%)
Total SNPs L
1592
Total inserted nucs L
35
Length L
12120 (99.8%)
Total SNPs S
211
Total inserted nucs S
6
Length S
1641 (97.8%)
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
L
A
35
G
G
43
C
C
48
T
T
49
C
G
57
A
C
59
T
T
62
C
C
64
T
T
65
G
G
71
T
A
72
T
C
85
T
G
93
A
A
109
G
T
121
C
T
131
A
C
136
T
T
151
C
Show more
M
A
51
T
T
65
C
T
71
C
G
76
A
A
80
G
G
84
A
C
85
T
A
88
G
A
90
G
T
98
C
A
104
G
A
107
G
A
112
G
A
117
G
C
119
T
A
128
G
G
136
A
A
146
G
Show more
S
G
54
A
A
61
G
C
64
T
G
67
A
G
99
A
A
118
G
C
142
T
T
157
C
C
166
T
C
178
A
A
180
G
T
182
C
T
220
C
G
229
A
C
235
T
A
247
G
T
250
A
G
262
A
Show more
Deletions
M
5289-5299
Insertions
L
ins_66:CC, ins_11931:GT, ins_12108:CACCGCTCATTTCAGTTTGATTATTTCTAGG
M
ins_5169:G
S
ins_1536:CCCTT, ins_1581:C
Amino acid substitutions
Substitutions called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
GPC
GPC:
Y
7
C
GPC:
I
9
V
GPC:
C
15
Y
GPC:
E
19
G
GPC:
R
28
E
GPC:
D
33
N
GPC:
T
34
A
GPC:
M
35
V
GPC:
P
38
S
GPC:
G
39
S
GPC:
N
41
S
GPC:
P
42
Q
GPC:
S
44
P
GPC:
V
48
T
GPC:
S
49
R
GPC:
A
51
T
GPC:
S
53
P
GPC:
I
54
V
Show more
NP
NP:
R
15
K
NP:
N
42
S
NP:
D
116
E
NP:
T
124
A
NP:
G
125
N
NP:
N
150
H
NP:
H
195
R
NP:
D
199
E
NP:
I
246
V
NP:
R
270
K
NP:
S
275
N
NP:
S
301
G
NP:
V
436
I
RdRp
RdRp:
S
6
N
RdRp:
S
19
T
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
V
RdRp:
R
80
K
RdRp:
V
82
I
RdRp:
L
90
I
RdRp:
L
94
M
RdRp:
I
114
V
RdRp:
T
163
A
RdRp:
A
168
T
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
I
223
M
RdRp:
K
275
R
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequences
Aligned nucleotide sequences
Aligned amino acid sequences
L
M
S
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