This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PCM0.1

Turkey/LOC_000PCM0.1/2008
E. Ozkaya, E. Dincer, A. Carhan, Y. Uyar, M. Ertek, C. A. Whitehouse & A. Ozkul

Ankara University, Faculty of Veterinary Medicine, Department of Virology

Sample details

Collection date
2008
Earliest release date
2010-02-27
Sampling location
Turkey
Isolate name
SVS98/08

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2010-02-27
INSDC accession M segment

Host

Host

Submission details

Submission ID
GU320689.1.M
Submitting group
Date submitted
2026-09-16 13:50:39 UTC
Date released
2026-09-16 13:52:47 UTC

Clade & Lineage

Closest reference M segment
M (MH396653.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs M segment
69
Length M segment
417 (7.64%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & MH396653.1 references

Substitutions

M segment

  • C4648T
  • A4660G
  • A4663G
  • T4672C
  • A4685G
  • A4690T
  • C4697A
  • A4709G
  • G4714A
  • A4716G
  • C4720T
  • A4723G
  • A4726G
  • T4738A
  • T4739C
  • G4741A
  • C4744T
  • A4747G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & MH396653.1 references

Substitutions

GPC

  • GPC:K1533E
  • GPC:E1534D
  • GPC:Q1537K
  • GPC:N1541D
  • GPC:K1543R
  • GPC:N1564D
  • GPC:C1566S
  • GPC:G1590S
  • GPC:I1591V
  • GPC:V1595L
  • GPC:F1600L
  • GPC:T1601L
  • GPC:T1604A
  • GPC:I1607V
  • GPC:I1610V
  • GPC:R1618K
  • GPC:K1648R
  • GPC:N1655S
Deletions
N/A
Insertions
N/A

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