This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PCM0.1

Algeria/LOC_000PCM0.1/2009-06-05
M. Kautman, G. Tiar, A. Papa & P. Siroky

University of Veterinary and Pharmaceutical Sciences Brno, Department of Biology and Wildlife Diseases

Sample details

Collection date
2009-06-05
Earliest release date
2016-03-29
Sampling location
Algeria (Aflou)
Isolate name
VFU-FVHE-DBWD-7517ALG

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2016-03-29
INSDC accession S

Host

Host

Submission details

Submission ID
KT599097.1.S
Submitting group
Date submitted
2026-07-07 12:47:52 UTC
Date released
2026-07-07 12:51:35 UTC

Lineage

Segment S Lineage
VI

Files

Annotations

Alignment and QC

Total SNPs S
75
Length S
362 (21.7%)
Stop codons S
NP:127
Total stop codons S
1

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C310T
  • T313A
  • A325G
  • G328A
  • A331T
  • C332T
  • T334G
  • A337G
  • C343T
  • G346A
  • A349G
  • T352C
  • G353A
  • A355G
  • G356A
  • A358C
  • C361T
  • T364C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:A100T
  • NP:G101S
  • NP:V117I
  • NP:T124S
  • NP:G125S
  • NP:Q127*
  • NP:V141I
  • NP:A146T
  • NP:V163L
  • NP:M164A
  • NP:S165P
  • NP:L179I
  • NP:G185S
  • NP:V198I
  • NP:D199E
Deletions
N/A
Insertions
N/A

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