This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PCM0.1

Iran/LOC_000PCM0.1/2015-08-02
M. Fazlalipour, V. Baniasadi, S. M. Mirghiasi, T. Jalali, S. Khakifirouz, S. Azad-Manjiri, V. Mahmoodi, H. R. Naderi, R. Zarandi, M. Salehi-Vaziri & M. Mirghiasi

Tehran University of Medical Sciences, Virology

Sample details

Collection date
2015-08-02
Earliest release date
2016-01-19
Sampling location
Iran
Isolate name
Iran-4596

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-23 14:57insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-01-19
INSDC accession S

Host

Host

Submission details

Submission ID
KU201597.1.S
Submitting group
Date submitted
2026-06-23 14:57:32 UTC
Date released
2026-06-23 15:00:08 UTC

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
61
Length S
480 (28.7%)

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • C166T
  • G169A
  • T172C
  • C178A
  • T182C
  • G190A
  • T193C
  • G196A
  • C208T
  • C217T
  • G229A
  • C235T
  • A268C
  • G271A
  • T289C
  • G292A
  • C295T
  • A298C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
Deletions
N/A
Insertions
N/A

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