This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
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Loculus
Crimean-Congo Hemorrhagic Fever Virus
Crimean-Congo Hemorrhagic Fever Virus
Test Dummy Organism
Test organism (with files)
Ebola Sudan
Test organism (without alignment)
West Nile Virus
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LOC_000PC8T.1
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Display Name: India/LOC_000PC8T.1/2019
P. Yadav,
A. Shete-Aich,
D. Nyayanit &
R. Sahay
Sample details
Collection date
2019
Collection date (lower bound)
2019-01-01
Collection date (upper bound)
2019-12-31
Earliest release date
2021-08-07
Collection country
India
Collection subdivision level 1
Gujarat State, Amreli
Isolate name
MCL-19-T-2032
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2025-09-12 15:10
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
Authors
Author affiliations
National Institute of Virology, Maximum Containment Laboratory
INSDC
NCBI release date
2021-08-07
INSDC accession L
MW298533.1
Alignment and QC metrics L
Length L
11919
Total SNPs L
1559
Total inserted nucs L
2
Total deleted nucs L
0
Total ambiguous nucs L
0
Total unknown nucs L
0
Total frame shifts L
0
Completeness L
98.42%
Submission details
Submission ID
MW298533.1.L
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-09-12 15:10:31 UTC
Date released
2025-09-12 15:15:01 UTC
Files
Annotations
LOC_000PC8T.1.embl
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
L
L:
T
10
C
L:
G
23
T
L:
A
35
G
L:
G
43
C
L:
C
48
T
L:
T
49
C
L:
C
59
T
L:
C
64
T
L:
T
65
G
L:
G
71
T
L:
A
72
T
L:
C
85
T
L:
G
93
A
L:
A
109
G
L:
G
112
A
L:
T
121
C
L:
T
131
A
L:
C
136
T
Show more
Deletions
None
Insertions
ins_L:66:CC
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
NC_005300.2
&
NC_005302.1
references
Substitutions
RdRp
RdRp:
S
6
N
RdRp:
S
19
T
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
V
RdRp:
Y
72
H
RdRp:
R
80
K
RdRp:
V
82
I
RdRp:
L
90
I
RdRp:
I
114
V
RdRp:
I
157
M
RdRp:
T
163
V
RdRp:
A
168
T
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
V
214
I
Show more
Deletions
None
Insertions
None
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