This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000PC8T.1

India/LOC_000PC8T.1/2014
P. D. Yadav

National Institute of Virology, Maximum Containment Laboratory

Sample details

Collection date
2014
Earliest release date
2016-02-13
Sampling location
India (Kutch)
Isolate name
NIV149210

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-06-08 11:34insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2016-02-13
INSDC accession S segment

Submission details

Submission ID
KT724950.1.S
Submitting group
Date submitted
2026-06-08 11:34:19 UTC
Date released
2026-06-08 11:37:43 UTC

Clade & Lineage

Closest reference S segment
S1 (OL774851.1) (variant)

Files

Annotations

Alignment and QC

Total SNPs S segment
71
Length S segment
522 (28.9%)

Nucleotide mutations

Mutations called relative to the NC_005301.3 & OL774851.1 references

Substitutions

S segment

  • C126T
  • T141C
  • C150T
  • T166C
  • A173G
  • G174A
  • G180A
  • C183T
  • A186G
  • C198T
  • C201T
  • C222T
  • G231A
  • G240A
  • A252C
  • T261C
  • T267C
  • T273C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3 & OL774851.1 references

Substitutions

NP

  • NP:K45R
  • NP:D116E
  • NP:N150H
  • NP:Q179L
  • NP:D199E
Deletions
N/A
Insertions
N/A

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