This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.
X
Loculus
Organisms
CCHF (Multi-Ref)
SeqSets
Login
Loculus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
CCHF (Multi-Ref)
Test Dummy Organism
Test organism (with files)
Ebola Sudan
Enterovirus
Test organism (without alignment)
West Nile Virus
SeqSets
Login
Docs
API docs
CCHF (Multi-Ref)
|
Browse data
Submit sequences
Select organism section
Browse data
Submit sequences
LOC_000P9VM.1
Download
Download FASTA
Download metadata TSV
Russia/LOC_000P9VM.1/1967
J. W. Koehler,
K. L. Delp,
B. J. Kearney,
T. A. Conrad,
R. J. Schoepp,
A. R. Garrison,
L. A. Altimura,
C. A. Rossi &
T. D. Minogue
USAMRIID, DSD
Sample details
Collection date
1967
Earliest release date
2017-04-02
Sampling location
Russia
Isolate name
UCCR4405
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-02 18:05
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://#TODO-MVP/open
INSDC
NCBI release date
2017-04-02
INSDC accession L
KY484030.1
INSDC accession M
KY484029.1
INSDC accession S
KY484028.1
Submission details
Submission ID
KY484030.1.L/KY484029.1.M/KY484028.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-02 18:05:46 UTC
Date released
2026-03-02 18:08:38 UTC
Host
Host
Homo sapiens
Files
Annotations
LOC_000P9VM.1.embl
Alignment and QC
Total SNPs M
1067
Total inserted nucs M
5
Total deleted nucs M
3
Length M
5364 (98.3%)
Variant M
False
Total SNPs S
255
Total inserted nucs S
16
Total deleted nucs S
2
Length S
1671 (91.7%)
Variant S
False
Total SNPs L
1310
Total inserted nucs L
43
Length L
12151 (100%)
Variant L
False
Nucleotide mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
L segment
G
23
C
A
35
G
A
42
T
G
43
C
T
49
C
A
53
G
T
58
C
C
59
T
C
63
T
C
64
G
T
66
C
A
72
G
A
73
T
C
76
A
A
91
G
G
93
A
C
100
T
A
109
G
Show more
M segment
T
36
C
G
46
A
A
47
G
A
57
T
A
60
C
T
63
C
T
64
C
T
67
A
G
72
C
A
76
G
T
78
C
T
79
C
G
80
A
C
88
T
A
95
G
T
96
C
T
98
C
C
99
T
Show more
S segment
C
31
G
T
33
C
G
34
T
A
51
G
T
63
C
A
65
G
C
81
T
A
93
G
A
98
T
C
99
T
A
105
G
G
107
A
G
118
A
C
126
T
T
141
C
C
150
T
G
155
A
T
159
A
Show more
Deletions
M segment
326-328
S segment
15, 16
Insertions
L segment
ins_25:T, ins_67:C, ins_11928:CT, ins_12096:TCATACCAGTTTCATTATTTGAAGGGTGTGGGGGGAACG
M segment
ins_0:TCTC, ins_5167:T
S segment
ins_0:TCTCAAAGAAACACGT
Amino acid mutations
Mutations called relative to the
NC_005301.3
,
MH396653.1
&
OL774851.1
references
Substitutions
GPC
GPC:
I
3
A
GPC:
S
4
L
GPC:
M
6
V
GPC:
Y
7
C
GPC:
A
8
F
GPC:
V
9
I
GPC:
F
10
L
GPC:
C
11
Y
GPC:
C
15
S
GPC:
K
19
G
GPC:
T
20
A
GPC:
N
21
H
GPC:
G
22
R
GPC:
P
23
Q
GPC:
H
24
S
GPC:
G
26
A
GPC:
N
31
G
GPC:
H
33
N
Show more
NP
NP:
N
9
S
NP:
Y
20
F
NP:
G
23
E
NP:
V
27
M
NP:
S
39
N
NP:
A
100
S
NP:
S
109
N
NP:
Q
179
L
NP:
D
199
E
NP:
K
265
R
NP:
R
270
K
NP:
A
307
P
NP:
Y
311
F
NP:
V
327
I
NP:
N
419
S
NP:
R
428
K
RdRp
RdRp:
S
6
N
RdRp:
S
19
T
RdRp:
D
55
A
RdRp:
Y
60
N
RdRp:
R
63
H
RdRp:
S
67
L
RdRp:
R
80
K
RdRp:
M
172
V
RdRp:
R
174
K
RdRp:
S
205
P
RdRp:
N
206
Y
RdRp:
K
218
R
RdRp:
I
223
L
RdRp:
K
275
R
RdRp:
I
279
V
RdRp:
V
352
I
RdRp:
N
448
S
RdRp:
N
453
S
Show more
Deletions
GPC
GPC:77
Insertions
N/A
L (unaligned)
M (unaligned)
S (unaligned)
L (aligned)
M (aligned)
S (aligned)
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue