This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P9ST.1

Iran/LOC_000P9ST.1/2016-06-13
V. Baniasadi, R. Ghasemian, M. Fazlalipour, T. Jalali, Y. Jamshidi, T. Mohammadi, S. Azad-Manjiri, M. Hosseini, S. Azizizadeh, R. Mirahmadi, S. Khakifirouz & M. Salehi-Vaziri

Tehran University of Medical Sciences, Virology

Sample details

Collection date
2016-06-13
Earliest release date
2017-03-26
Sampling location
Iran
Isolate name
Iran-4917

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-13 15:41insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2017-03-26
INSDC accession S

Submission details

Submission ID
KY274404.1.S
Submitting group
Date submitted
2026-03-13 15:41:04 UTC
Date released
2026-03-13 15:47:29 UTC

Host

Host

Lineage

Segment S Lineage
V

Files

annotations

Alignment and QC

Total SNPs S
82
Length S
535 (32%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G134T
  • T157C
  • C166T
  • G171A
  • T175A
  • C178A
  • T182C
  • C187T
  • G189A
  • T199C
  • T211C
  • C217T
  • C235T
  • C244T
  • T250G
  • T253C
  • G259A
  • G262A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:V27L
  • NP:S39N
  • NP:R45K
  • NP:A100S
  • NP:S109N
  • NP:T111A
  • NP:T124A
  • NP:G125N
  • NP:H195R
  • NP:D199E
Deletions
N/A
Insertions
N/A

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