This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P9ST.1

Display Name: China/LOC_000P9ST.1/2019-03
Y. J. Kang, C. Shi, J. Zhou, J. Qian, Y. Qiu, G. Ge & Y. Kang

Sample details

Collection date
2019-03
Collection date (lower bound)
2019-03-01
Collection date (upper bound)
2019-03-31
Earliest release date
2022-05-10
Collection country
China
Isolate name
CVA10/Wuxi214/China/2019

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-11-27 07:37insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Wuxi Children's Hospital, Department of Pediatric Laboratory

INSDC

NCBI release date
2022-05-10

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics

Length
7373
Total SNPs
1494
Total inserted nucs
16
Total deleted nucs
12
Total ambiguous nucs
0
Total unknown nucs
0
Total frame shifts
0
Completeness
99.46%

Submission details

Submission ID
MZ491034.1.CV-A10
Submitting group
Date submitted
2025-11-27 07:37:01 UTC
Date released
2025-11-27 08:23:09 UTC

Clade

Clade CV-A10
C

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • C21T
  • C27T
  • T28C
  • T56C
  • G58A
  • A60T
  • C62T
  • T64C
  • T67A
  • A68G
  • C69T
  • C90A
  • T96C
  • T102A
  • A106T
  • C108A
  • A109C
  • A118T
    • Deletions
    94, 127, 308-310, 703-709
    Insertions
    ins_0:T, ins_103:ACT, ins_124:GCTA, ins_687:ATTAACA, ins_7342:G

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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