This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_000P9M3.1

Oman/LOC_000P9M3.1/2013
B. Atkinson, S. Al-Abri, H. Al-Kindi, S. Bawakir, A. Al-Jardani, I. Al-Abaidani, S. Al-Mahrooqi, A. Al-Maani, S. Almahrouqi, B. Al-Rawahi, N. Beeching & R. Hewson

Public Health England, Research

Sample details

Collection date
2013
Earliest release date
2018-05-01
Sampling location
Oman
Isolate name
Oman 2013-108S

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-30 16:07insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2018-05-01
INSDC accession S

Submission details

Submission ID
MH037286.1.S
Submitting group
Date submitted
2026-03-30 16:07:03 UTC
Date released
2026-03-30 16:12:50 UTC

Host

Host

Lineage

Segment S Lineage
IV.1

Files

Annotations

Alignment and QC

Total SNPs S
169
Length S
1449 (86.7%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G67A
  • T79C
  • A81G
  • G99A
  • A109G
  • A118G
  • C166T
  • G169A
  • T172C
  • C178A
  • T182C
  • G190A
  • G196A
  • T199C
  • C208T
  • C217T
  • G229A
  • C235T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:N9S
  • NP:R15K
  • NP:V83A
  • NP:D116E
  • NP:T124S
  • NP:G125N
  • NP:H195R
  • NP:D199E
  • NP:I246V
  • NP:R270K
  • NP:S301G
  • NP:A307V
  • NP:E322D
  • NP:Q405L
  • NP:K428R
  • NP:V436I
Deletions
N/A
Insertions
N/A

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