This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001K60N.1

Viet_Nam/LOC_001K60N.1/2025-10-05
N. P. K. Le, K. V. Nguyen, T. M. T. Pham, D. T. K. Le, U. T. N. Phan, Q. C. Luong, T. M. Cao, Q. D. Pham, T. V. Nguyen & T. T. T. Nguyen

Pasteur Institute, Microbiology and Immunology

Sample details

Collection date
2025-10-05
Earliest release date
2026-10-28
Sampling location
Viet Nam (Dong Nai)
Isolate name
EV_A71_2025_HFMD-089_DON_VNM

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-10-28
NCBI update date
2026-10-29
INSDC accession

Host

Host

Submission details

Submission ID
QB199374.1
Submitting group
Date submitted
2026-11-04 12:16:29 UTC
Date released
2026-11-04 12:30:00 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
156
Length
891 (12%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • G2441A
  • G2465A
  • T2471C
  • T2483C
  • A2491G
  • G2492A
  • C2501T
  • C2503A
  • T2513A
  • C2517T
  • C2519T
  • C2527A
  • A2528G
  • G2529A
  • C2531T
  • C2534G
  • G2540A
  • T2546C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP1

  • VP1:K18R
  • VP1:P22Q
  • VP1:P27S
  • VP1:P30Q
  • VP1:D31N
  • VP1:K98E
  • VP1:R145E
  • VP1:D167E
  • VP1:P172Q
  • VP1:S183L
  • VP1:S240T
  • VP1:E244K
  • VP1:S246P
  • VP1:I262V
  • VP1:S275A
  • VP1:D282N
Deletions
N/A
Insertions
N/A

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