This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001K2XX.1

Canada/LOC_001K2XX.1/2024-10-02
K. Pabbaraju, A. Wong, K. Gill, H. Y. Zhou, N. Zelyas, G. Tipples, J. N. Kanji & T. Lynch

Alberta Precision Laboratory, Specialized Diagnostics

Sample details

Collection date
2024-10-02
Earliest release date
2026-10-14
Sampling location
Canada (Alberta)
Isolate name
2024_D209_CSF

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-10-14
NCBI update date
2026-10-14
INSDC accession

Host

Host

Submission details

Submission ID
PZ914357.1
Submitting group
Date submitted
2026-11-04 12:16:29 UTC
Date released
2026-11-04 12:30:00 UTC

Clade

Clade EV-A71
C1-like

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
34
Length
188 (2.54%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • T959C
  • A965G
  • C974G
  • T977C
  • C983T
  • G989A
  • G995A
  • C996T
  • T998A
  • C1001T
  • A1007C
  • A1034G
  • A1043C
  • G1050A
  • G1052C
  • T1067C
  • A1070C
  • C1076T
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions

VP2

  • VP2:G34S
  • VP2:N45S
Deletions
N/A
Insertions
N/A

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