This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JXY2.1

Thailand/LOC_001JXY2.1/2024-12-30
N. Maneekarn, P. Khamrin & K. Kumthip

Faculty of Medicine, Chiang Mai University, Department of Microbiology

Sample details

Collection date
2024-12-30
Earliest release date
2026-10-11
Sampling location
Thailand
Isolate name
CMH-ST137-24/THA

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-10-11
NCBI update date
2026-10-11
INSDC accession

Host

Host

Submission details

Submission ID
PZ727241.1
Submitting group
Date submitted
2026-10-13 10:59:20 UTC
Date released
2026-10-13 11:12:39 UTC

Clade

Clade EV-A71
C

Genotype

Genotype
EV-A71

Alignment and QC

Total SNPs
59
Total inserted nucs
5
Total deleted nucs
4
Length
433 (5.83%)

Nucleotide mutations

Mutations called relative to the U22521.1 reference

Substitutions
  • C232T
  • T248C
  • G259A
  • A267G
  • C268T
  • G269A
  • G278A
  • T279C
  • G293A
  • C303T
  • C308A
  • T321C
  • C322T
  • T329C
  • C333T
  • A336G
  • T337A
  • G358A
Deletions
220, 227, 228, 638
Insertions
ins_603:TGG, ins_619:GG

Amino acid substitutions

Substitutions called relative to the U22521.1 reference

Substitutions
N/A
Deletions
N/A
Insertions
N/A

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