This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JAYP.1

Taiwan/LOC_001JAYP.1/2024-04-03
S.-L. Yang & H.-H. Huang

Taiwan Centers for Disease Control, Ministry of Health and Welfare

Sample details

Collection date
2024-04-03
Earliest release date
2026-07-05
Sampling location
Taiwan
Isolate name
KHC0304a

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-07-05
NCBI update date
2026-07-05
INSDC accession

Host

Host

Submission details

Submission ID
PZ600565.1
Submitting group
Date submitted
2026-07-13 16:59:25 UTC
Date released
2026-07-13 17:10:57 UTC

Clade

Clade EV-D68
A2/D

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
73
Total deleted nucs
3
Length
471 (6.43%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • T2389C
  • C2390T
  • A2392G
  • C2394A
  • C2397T
  • G2405A
  • A2406G
  • G2412A
  • T2421C
  • G2425A
  • G2427T
  • T2433C
  • A2442G
  • T2451C
  • T2454C
  • T2457A
  • G2463A
  • G2469A
Deletions
2806-2808
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:S1L
  • VP1:N2E
  • VP1:G6E
  • VP1:V13I
  • VP1:T46S
  • VP1:G76S
  • VP1:K84R
  • VP1:A92T
  • VP1:S95G
  • VP1:A96E
  • VP1:G97R
  • VP1:T98I
  • VP1:H99D
  • VP1:F103Y
  • VP1:N142S
  • VP1:D144N
Deletions

VP1

VP1:140
Insertions
N/A

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