This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JAP7.1

Taiwan/LOC_001JAP7.1/2024-07-03
S.-L. Yang & H.-H. Huang

Taiwan Centers for Disease Control, Ministry of Health and Welfare

Sample details

Collection date
2024-07-03
Earliest release date
2026-07-05
Sampling location
Taiwan
Isolate name
NTC0307a

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-07-05
NCBI update date
2026-07-05
INSDC accession

Host

Host

Submission details

Submission ID
PZ600536.1
Submitting group
Date submitted
2026-07-13 16:59:25 UTC
Date released
2026-07-13 17:10:57 UTC

Clade

Clade EV-D68
B3

Genotype

Genotype
EV-D68

Alignment and QC

Total SNPs
74
Length
437 (5.93%)

Nucleotide mutations

Mutations called relative to the AY426531.1 reference

Substitutions
  • T2389A
  • C2390T
  • A2392G
  • C2394G
  • A2415G
  • T2421C
  • G2425A
  • G2427C
  • T2433C
  • C2439T
  • T2454C
  • G2463A
  • C2475T
  • C2478T
  • T2487C
  • G2490A
  • C2500T
  • T2517A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the AY426531.1 reference

Substitutions

VP1

  • VP1:S1I
  • VP1:N2E
  • VP1:V13I
  • VP1:G76S
  • VP1:K84R
  • VP1:N90D
  • VP1:A92T
  • VP1:S95T
  • VP1:G97Q
  • VP1:H99D
  • VP1:K110R
  • VP1:N142S
  • VP1:D144N
  • VP1:S145N
Deletions
N/A
Insertions
N/A

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