This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001H979.1

Tajikistan/LOC_001H979.1/2023-05-23
J. D'Addiego, M. Mullojanova, T. Hikmatov, F. Tishkova & R. Hewson

UK Health Security Agency, Research & Evaluation

Sample details

Collection date
2023-05-23
Earliest release date
2025-06-15
Sampling location
Tajikistan
Isolate name
CCHFV_24_179

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-21 21:26insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-06-15
INSDC accession S

Submission details

Submission ID
PV738575.1.S
Submitting group
Date submitted
2026-03-21 21:26:50 UTC
Date released
2026-03-21 21:36:53 UTC

Host

Host

Lineage

Segment S Lineage
IV.2

Files

Annotations

Alignment and QC

Total SNPs S
61
Total unknown nucs S
11
Length S
503 (29.4%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • A856G
  • T862C
  • G864A
  • C871T
  • G879A
  • G901A
  • T904C
  • T907C
  • C925T
  • T928C
  • T934C
  • A937G
  • A955G
  • A956G
  • C958T
  • T991C
  • T997C
  • T1006C
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R270K
  • NP:S275N
  • NP:S301G
  • NP:K354R
Deletions
N/A
Insertions
N/A

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