This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001H5S8.1

France/LOC_001H5S8.1/2024
M. Gasparine & A. Falchi

University of Corsica, Unite des Virus Emergents

Sample details

Collection date
2024
Earliest release date
2025-08-10
Sampling location
France
Isolate name
2447

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-21 21:26insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-08-10
INSDC accession S

Submission details

Submission ID
PV976897.1.S
Submitting group
Date submitted
2026-03-21 21:26:50 UTC
Date released
2026-03-21 21:36:53 UTC

Host

Host

Lineage

Segment S Lineage
III

Files

Annotations

Alignment and QC

Total SNPs S
69
Length S
888 (53.1%)
Variant S
False

Nucleotide mutations

Mutations called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

S

  • G15A
  • G17A
  • G20T
  • G47C
  • A50G
  • G54A
  • G67A
  • G99A
  • G100A
  • C178G
  • T181C
  • G189A
  • T199C
  • G202A
  • T220C
  • G229A
  • C235T
  • A247G
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_005301.3, NC_005300.2 & NC_005302.1 references

Substitutions

NP

  • NP:R15K
  • NP:R45K
  • NP:K91R
  • NP:T124A
  • NP:G125N
  • NP:L179Q
  • NP:H195R
  • NP:I246V
Deletions
N/A
Insertions
N/A

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