This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001GFZM.1

China/LOC_001GFZM.1/2024-04-23
H. Zeng

Guangdong Provincial Centre for Disease Control and Prevention, Institute of Pathogenic Microbiology

Sample details

Collection date
2024-04-23
Earliest release date
2025-07-20
Sampling location
China
Isolate name
2024-EV-0596

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-27 16:02insdc_ingest_userOPEN
Data use terms URL

INSDC

NCBI release date
2025-07-20
NCBI update date
2025-07-20
INSDC accession

Host

Host

Submission details

Submission ID
PQ872634.1
Submitting group
Date submitted
2026-02-27 16:01:59 UTC
Date released
2026-02-27 16:17:03 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Alignment and QC

Total SNPs
220
Length
891 (12%)
Variant
False

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • T2448G
  • G2452C
  • G2453C
  • A2454C
  • A2460T
  • T2469C
  • G2475A
  • G2476A
  • C2481G
  • C2483A
  • T2485A
  • C2486A
  • G2489A
  • T2493G
  • G2494A
  • G2495A
  • T2496C
  • T2499C
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the U05876.1 reference

Substitutions

VP1

  • VP1:G3P
  • VP1:A11T
  • VP1:T13N
  • VP1:S14N
  • VP1:R15Q
  • VP1:G17N
  • VP1:A19S
  • VP1:S22A
  • VP1:E26L
  • VP1:N33E
  • VP1:E36S
  • VP1:L43V
  • VP1:Q59S
  • VP1:E61K
  • VP1:T79A
  • VP1:M119L
  • VP1:A139V
  • VP1:T164K
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue