This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001DNMA.1

Display Name: Russia/LOC_001DNMA.1/2024-07-22
O. Kanaeva, N. Romanenkova, V. Evseeva, N. Tolstykh, M. Blokhinova, K. Antonenkov, V. Sbarzaglia, N. Tsyganova & A. Hasanova

Sample details

Collection date
2024-07-22
Collection date (lower bound)
2024-07-22
Collection date (upper bound)
2024-07-22
Earliest release date
2025-04-30
Collection country
Russia
Collection subdivision level 1
Saratov
Isolate name
SPb_11177/24EVI/Saratov/2025/RU

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-27 14:20insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Pasteur Research Institute of Epidemiology and Microbiology, Saint Petersburg, Laboratory of Etiology and Control of Virus Infections

INSDC

NCBI release date
2025-04-30
INSDC accession CV-A10

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics CV-A10

Length CV-A10
729
Total SNPs CV-A10
168
Total inserted nucs CV-A10
0
Total deleted nucs CV-A10
0
Total ambiguous nucs CV-A10
0
Total unknown nucs CV-A10
0
Total frame shifts CV-A10
0
Completeness CV-A10
9.84%

Submission details

Submission ID
PV567715.1.CV-A10
Submitting group
Date submitted
2025-10-27 14:19:39 UTC
Date released
2025-10-27 15:13:08 UTC

Clade

Clade CV-A10
D

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • C2169G
  • C2172T
  • A2193G
  • T2199A
  • A2208C
  • C2226T
  • C2229T
  • A2235T
  • C2238T
  • A2242C
  • A2244C
  • A2247G
  • C2250A
  • T2256A
  • T2259A
  • T2262A
  • T2268C
  • C2271T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

    Report an issue with this sequence or metadata

    Create GitHub issue