This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001DMHK.1

Display Name: France/LOC_001DMHK.1/2025-07-08
M. Bisseux, A. Mirand, J.-L. Bailly & C. Henquell

Sample details

Collection date
2025-07-08
Collection date (lower bound)
2025-07-08
Collection date (upper bound)
2025-07-08
Earliest release date
2025-10-07
Collection country
France
Isolate name
CVA10_250026513002_FRA25

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-13 08:44insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
Centre National de Reference des Enterovirus et Parechovirus, CHU Clermont-Ferrand, Virologie

INSDC

NCBI release date
2025-10-07
INSDC accession CV-A10

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics CV-A10

Length CV-A10
7392
Total SNPs CV-A10
1489
Total inserted nucs CV-A10
15
Total deleted nucs CV-A10
14
Total ambiguous nucs CV-A10
0
Total unknown nucs CV-A10
0
Total frame shifts CV-A10
0
Completeness CV-A10
99.76%

Submission details

Submission ID
PX441809.1.CV-A10
Submitting group
Date submitted
2025-10-13 08:44:32 UTC
Date released
2025-10-13 09:40:02 UTC

Clade

Clade CV-A10
D

Genotype

Genotype
CV-A10

Files

Annotations

Nucleotide mutations

Mutations called relative to the AY421767.1 reference

Substitutions

  • T28C
  • C40T
  • G63A
  • T64C
  • A89C
  • C90A
  • T95A
  • T96C
  • G101T
  • T102A
  • C108A
  • A109C
  • T110G
  • C125A
  • T130C
  • G133A
  • C137T
  • C141T
    • Deletions
    121, 126, 308-310, 605, 701-708
    Insertions
    ins_102:C, ins_116:CAA, ins_573:T, ins_610:A, ins_690:ATCGCACA, ins_7372:A

    Amino acid mutations

    Mutations called relative to the AY421767.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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