This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001DLFR.1

Display Name: China/LOC_001DLFR.1/2024-05-01
B. L. Sun, Y. Y. Shi & Y. L. Yao

Sample details

Collection date
2024-05-01
Collection date (lower bound)
2024-05-01
Collection date (upper bound)
2024-05-01
Earliest release date
2025-08-13
Collection country
China
Collection subdivision level 1
Wuhan, Hubei
Isolate name
wuhan2024-3

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-10-13 08:44insdc_ingest_userOPEN
Data use terms URL

Authors

Author affiliations
School of Medicine, Jianghan University, Department of Immunology

INSDC

NCBI release date
2025-08-13
INSDC accession CV-A16

Host

Host taxon id
Host name scientific
Homo sapiens

Alignment and QC metrics CV-A16

Length CV-A16
207
Total SNPs CV-A16
38
Total inserted nucs CV-A16
0
Total deleted nucs CV-A16
16
Total ambiguous nucs CV-A16
0
Total unknown nucs CV-A16
0
Total frame shifts CV-A16
0
Completeness CV-A16
3.01%

Submission details

Submission ID
PX095330.1.CV-A16
Submitting group
Date submitted
2025-10-13 08:44:32 UTC
Date released
2025-10-13 09:38:58 UTC

Clade

Clade CV-A16
B1c

Genotype

Genotype
CV-A16

Files

Annotations

Nucleotide mutations

Mutations called relative to the U05876.1 reference

Substitutions

  • A768C
  • C771T
  • A774G
  • G780T
  • T783A
  • C786A
  • C789T
  • A792G
  • G798A
  • A804T
  • A810G
  • A813G
  • A816T
  • T819G
  • T822C
  • C828T
  • C834A
  • C837T
    • Deletions
    951-966
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the U05876.1 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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